Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | Positive | 467586 - 467661 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 467714 - 467790 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 467847 - 467923 | Not Available |
| eal domain-containing protein | JYB87_02060 | Q8EJM6 | Negative | 468092 - 470011 | 73020.9 |
| transglutaminase-like cysteine peptidase | JYB87_02065 | Not Available | Negative | 470020 - 470664 | 24452.6 |
| ompa family protein | JYB87_02070 | P13794 | Negative | 470748 - 471365 | 23042.3 |
| tolc family outer membrane protein | JYB87_02075 | Q8G0Y6 | Negative | 471365 - 472756 | 51739.6 |
| hlyd family type i secretion periplasmic adaptor subunit | JYB87_02080 | Q7ANN5 | Negative | 472789 - 474171 | 51187.9 |
| type i secretion system permease/atpase | JYB87_02085 | P26760 | Negative | 474164 - 476248 | 76444.8 |
| vcbs domain-containing protein | JYB87_02090 | Not Available | Negative | 476453 - 494788 | 614764.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

