Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| so_0444 family cu/zn efflux transporter | JYB87_01895 | P45468 | Positive | 435645 - 437042 | 47988.6 |
| gnat family n-acetyltransferase | JYB87_01900 | P0AEH3 | Positive | 437865 - 438320 | 17443.8 |
| pbp1a family penicillin-binding protein | JYB87_01905 | Q9KNU5 | Negative | 438367 - 440928 | 94663.4 |
| pilus assembly protein pilm | JYB87_01910 | G3XD28 | Positive | 441107 - 442189 | 39506.5 |
| piln domain-containing protein | JYB87_01915 | G3XD30 | Positive | 442177 - 442761 | 22145.1 |
| type 4a pilus biogenesis protein pilo | JYB87_01920 | G3XD51 | Positive | 442758 - 443387 | 23775.4 |
| pilus assembly protein pilp | JYB87_01925 | G3XCX7 | Positive | 443384 - 443899 | 19160.0 |
| type iv pilus secretin pilq family protein | JYB87_01930 | P34750 | Positive | 443921 - 445972 | 74532.8 |
| shikimate kinase arok | JYB87_01935 | A1SB14 | Positive | 446181 - 446696 | 19155.9 |
| 3-dehydroquinate synthase | JYB87_01940 | A4YBT0 | Positive | 446696 - 447775 | 38849.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

