Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | JYB87_17735 | P10121 | Negative | 4007187 - 4008770 | 56661.7 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | JYB87_17740 | P0ADY0 | Positive | 4009027 - 4009617 | 21967.2 |
| duf1145 domain-containing protein | JYB87_17745 | P37614 | Positive | 4009611 - 4009898 | 10794.9 |
| duf4870 domain-containing protein | JYB87_17750 | Not Available | Negative | 4009917 - 4010234 | 11439.6 |
| mosc domain-containing protein | JYB87_17755 | P32157 | Negative | 4010270 - 4010974 | 26475.5 |
| ggdef domain-containing protein | JYB87_17760 | Q9HT84 | Negative | 4010993 - 4012450 | 55098.5 |
| ribokinase | JYB87_17765 | Q5GA22 | Negative | 4012840 - 4013685 | 30406.3 |
| patatin family protein | JYB87_17770 | P39407 | Negative | 4013713 - 4014567 | 31496.8 |
| excalibur calcium-binding domain-containing protein | JYB87_17775 | Not Available | Positive | 4014716 - 4015024 | 12140.4 |
| tonb-dependent siderophore receptor | JYB87_17780 | P16869 | Negative | 4015108 - 4017279 | 79307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

