Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 3977094 - 3977209 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3977346 - 3980235 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3980503 - 3982045 | Not Available |
| rna-binding protein | JYB87_17600 | Q44556 | Positive | 3982569 - 3983018 | 15873.3 |
| glutamate racemase | JYB87_17605 | Q0I0C5 | Negative | 3983036 - 3983848 | 29085.9 |
| trna (uridine(54)-c5)-methyltransferase trma | JYB87_17610 | A1S1Z8 | Positive | 3984036 - 3985139 | 42064.2 |
| hth-type transcriptional repressor fabr | JYB87_17615 | A8AKV8 | Negative | 3985150 - 3985791 | 24220.2 |
| fatty acid desaturase | JYB87_17620 | O94523 | Positive | 3985934 - 3987040 | 43367.1 |
| selenide, water dikinase seld | JYB87_17625 | A3DA84 | Positive | 3987143 - 3988177 | 35877.4 |
| trna 2-selenouridine(34) synthase mnmh | JYB87_17630 | B1KN07 | Positive | 3988178 - 3989287 | 42082.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

