Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | JYB87_01145 | P52692 | Positive | 262072 - 262947 | 33134.2 |
| trna (cytidine(34)-2'-o)-methyltransferase | JYB87_01150 | B8CHC9 | Negative | 263008 - 263472 | 17198.5 |
| hamp domain-containing protein | JYB87_01155 | P0AE84 | Negative | 263540 - 265015 | 55409.9 |
| response regulator | JYB87_01160 | P0AE89 | Negative | 265015 - 265701 | 25454.2 |
| spy/cpxp family protein refolding chaperone | JYB87_01165 | Q8XDZ4 | Positive | 265913 - 266482 | 21125.4 |
| cation diffusion facilitator family transporter | JYB87_01170 | Q1C296 | Positive | 266529 - 267422 | 32296.9 |
| nitrogen regulation protein nr(i) | JYB87_01175 | P03029 | Negative | 267497 - 268900 | 52049.6 |
| nitrogen regulation protein nr(ii) | JYB87_01180 | P19906 | Negative | 268916 - 269986 | 39311.4 |
| duf4124 domain-containing protein | JYB87_01185 | Not Available | Negative | 270112 - 270657 | 19709.6 |
| iron-containing alcohol dehydrogenase | JYB87_01190 | Q46856 | Negative | 270719 - 271885 | 43037.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

