Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | JYB87_16185 | Q5SK58 | Negative | 3680195 - 3681415 | 45365.8 |
| type ii/iv secretion system protein | JYB87_16190 | Q1D098 | Negative | 3681418 - 3683148 | 64162.9 |
| tetratricopeptide repeat protein | JYB87_16195 | Not Available | Negative | 3683163 - 3684431 | 45331.5 |
| aaa family atpase | JYB87_16200 | P45754 | Negative | 3684428 - 3685324 | 33095.5 |
| pilus (msha type) biogenesis protein mshl | JYB87_16205 | Q01565 | Negative | 3685328 - 3687025 | 60096.5 |
| msha biogenesis protein mshk | JYB87_16210 | Not Available | Negative | 3687028 - 3687363 | 11808.5 |
| msha biogenesis protein mshj | JYB87_16215 | Not Available | Negative | 3687347 - 3688006 | 25122.3 |
| piln domain-containing protein | JYB87_16220 | Not Available | Negative | 3688003 - 3688602 | 22571.2 |
| msha biogenesis protein mshi | JYB87_16225 | Not Available | Negative | 3688599 - 3689465 | 32364.6 |
| rnase e specificity factor csrd | JYB87_16230 | P13518 | Negative | 3689640 - 3691547 | 72952.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

