Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | JYB87_15085 | Q9KU21 | Positive | 3413840 - 3414607 | 29027.3 |
| Trna-phe | Not Available | Not Available | Positive | 3414858 - 3414933 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3414981 - 3415067 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3415098 - 3415184 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3415214 - 3415300 | Not Available |
| 16s rrna pseudouridine(516) synthase rsua | JYB87_15110 | Q9KRK5 | Negative | 3415510 - 3416202 | 25836.2 |
| peptidase m13 | JYB87_15115 | Q4PZA2 | Positive | 3416433 - 3418526 | 77933.9 |
| smi1/knr4 family protein | JYB87_15120 | Not Available | Positive | 3418660 - 3419064 | 15588.3 |
| duf4447 family protein | JYB87_15125 | Not Available | Positive | 3419088 - 3419585 | 18617.5 |
| duf1456 family protein | JYB87_15130 | P33355 | Positive | 3419637 - 3420101 | 18247.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

