Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1289 domain-containing protein | JYB87_15035 | Q8CW10 | Positive | 3402005 - 3402310 | 11702.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3402378 - 3402493 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3402570 - 3402645 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3402734 - 3405623 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3405891 - 3407433 | Not Available |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | JYB87_15060 | Q48269 | Negative | 3407864 - 3408688 | 29590.8 |
| duf4124 domain-containing protein | JYB87_15065 | Not Available | Positive | 3408784 - 3409218 | 16016.0 |
| atp-dependent chaperone clpb | JYB87_15070 | Q8EBE6 | Negative | 3409295 - 3411868 | 95708.0 |
| peptidoglycan editing factor pgef | JYB87_15075 | P33663 | Negative | 3412011 - 3412739 | 25779.8 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | JYB87_15080 | Q8ZBV7 | Negative | 3412736 - 3413713 | 36393.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

