Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggu family protein | JYB87_14035 | Q8EBY9 | Positive | 3163446 - 3163745 | 11023.6 |
| duf4426 domain-containing protein | JYB87_14040 | Not Available | Positive | 3163814 - 3164251 | 16666.1 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | JYB87_14045 | Q8EBY7 | Positive | 3164301 - 3164903 | 21512.5 |
| radical sam family heme chaperone hemw | JYB87_14050 | P52062 | Positive | 3164903 - 3166036 | 42404.4 |
| lysr family transcriptional regulator | JYB87_14055 | P30864 | Negative | 3166459 - 3167400 | 34861.3 |
| yggn family protein | JYB87_14060 | P0ADT1 | Negative | 3167699 - 3168484 | 28958.1 |
| duf469 family protein | JYB87_14065 | P38521 | Negative | 3168726 - 3169049 | 12496.6 |
| trna (guanosine(46)-n7)-methyltransferase trmb | JYB87_14070 | B8CS82 | Negative | 3169076 - 3169792 | 26670.8 |
| a/g-specific adenine glycosylase | JYB87_14075 | Q05869 | Positive | 3169959 - 3171071 | 41545.9 |
| oxidative damage protection protein | JYB87_14080 | A8H1J7 | Positive | 3171075 - 3171353 | 10814.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

