Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polymer-forming cytoskeletal protein | JYB87_12540 | Q9JMT6 | Positive | 2832419 - 2832829 | 14628.5 |
| lysr family transcriptional regulator | JYB87_12545 | O32255 | Positive | 2833012 - 2834007 | 38160.8 |
| omca/mtrc family decaheme c-type cytochrome | JYB87_12550 | P0DSN4 | Positive | 2834257 - 2836536 | 78404.8 |
| cold-shock protein | JYB87_12555 | P0A9Y1 | Negative | 2836882 - 2837085 | 7329.75 |
| duf2982 domain-containing protein | JYB87_12560 | Not Available | Negative | 2837426 - 2838094 | 25228.9 |
| ydcf family protein | JYB87_12565 | P0AB02 | Negative | 2838104 - 2838895 | 28896.4 |
| fructokinase | JYB87_12570 | P23917 | Negative | 2838945 - 2839847 | 31750.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | JYB87_12575 | P59735 | Negative | 2839844 - 2840689 | 31256.2 |
| phosphatase | JYB87_12580 | Q8EGF2 | Negative | 2840689 - 2841435 | 27033.1 |
| Ncrna_class:hammerhead_ribozyme | Not Available | Not Available | Positive | 2851349 - 2851420 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

