Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | JYB87_12440 | A3QCW5 | Positive | 2805042 - 2806070 | 37998.6 |
| trap transporter small permease | JYB87_12445 | Q9KQS0 | Positive | 2806130 - 2806780 | 24322.9 |
| trap transporter large permease subunit | JYB87_12450 | Q9HU16 | Positive | 2806789 - 2808183 | 48745.2 |
| sensor histidine kinase | JYB87_12455 | Q9HU20 | Positive | 2808256 - 2810052 | 67008.6 |
| sigma-54-dependent fis family transcriptional regulator | JYB87_12460 | Q9HU19 | Positive | 2810049 - 2811416 | 51221.9 |
| mfs transporter | JYB87_12465 | P37498 | Negative | 2811423 - 2812655 | 46110.6 |
| lysr family transcriptional regulator | JYB87_12470 | P27111 | Positive | 2812786 - 2813667 | 33377.7 |
| tetr/acrr family transcriptional regulator | JYB87_12475 | Not Available | Positive | 2814068 - 2814748 | 25528.0 |
| porin | JYB87_12480 | Not Available | Positive | 2814907 - 2815902 | 37107.0 |
| fad-binding protein | JYB87_12485 | Q8CVD0 | Positive | 2816044 - 2817759 | 61940.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

