Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | JYB87_12090 | Q6D8D4 | Negative | 2735065 - 2735538 | 17613.5 |
| outer membrane protein assembly factor bama | JYB87_12095 | A7MGT7 | Negative | 2735620 - 2738103 | 93301.2 |
| sigma e protease regulator rsep | JYB87_12100 | Q9KPV9 | Negative | 2738135 - 2739517 | 49913.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | JYB87_12105 | A0KZ17 | Negative | 2739534 - 2740721 | 42341.2 |
| phosphatidate cytidylyltransferase | JYB87_12110 | P0ABG2 | Negative | 2740727 - 2741584 | 31161.2 |
| isoprenyl transferase | JYB87_12115 | Q8EGH1 | Negative | 2741596 - 2742432 | 31533.6 |
| ribosome recycling factor | JYB87_12120 | A8FY39 | Negative | 2742515 - 2743072 | 20790.1 |
| ump kinase | JYB87_12125 | Q12NY5 | Negative | 2743100 - 2743831 | 26128.0 |
| elongation factor ts | JYB87_12130 | A1S4P1 | Negative | 2743902 - 2744753 | 30511.7 |
| 30s ribosomal protein s2 | JYB87_12135 | A3QGA3 | Negative | 2744875 - 2745600 | 26446.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

