Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | JYB87_11745 | A1S7P3 | Negative | 2672273 - 2673319 | 38321.8 |
| duf479 domain-containing protein | JYB87_11750 | A7FLF7 | Positive | 2673672 - 2674271 | 23093.7 |
| rlua family pseudouridine synthase | JYB87_11755 | Q8Z9J5 | Positive | 2674335 - 2674988 | 24709.8 |
| hypothetical protein | JYB87_11760 | Not Available | Negative | 2675031 - 2675426 | 14880.8 |
| trna lysidine(34) synthetase tils | JYB87_11765 | Q8EGF9 | Negative | 2675641 - 2677056 | 52703.5 |
| dna polymerase iii subunit alpha | JYB87_11770 | Q8X8X5 | Negative | 2677053 - 2680529 | 129472.0 |
| ribonuclease hii | JYB87_11775 | A1S4Q4 | Negative | 2680612 - 2681232 | 22027.8 |
| lipid-a-disaccharide synthase | JYB87_11780 | Q085C9 | Negative | 2681236 - 2682411 | 43164.0 |
| hypothetical protein | JYB87_11785 | Not Available | Negative | 2682609 - 2682884 | 10098.5 |
| hypothetical protein | JYB87_11790 | Not Available | Negative | 2682896 - 2683114 | 7811.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

