Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | JYB87_11495 | Q7N3E3 | Positive | 2609083 - 2610147 | 39556.3 |
| efflux rnd transporter permease subunit | JYB87_11500 | P25197 | Positive | 2610164 - 2613415 | 117522.0 |
| efflux rnd transporter permease subunit | JYB87_11505 | D0ZEW1 | Positive | 2613412 - 2616459 | 111908.0 |
| phosphotransferase | JYB87_11510 | P44162 | Negative | 2616513 - 2617229 | 28005.0 |
| trm112 family protein | JYB87_11515 | B0TK42 | Negative | 2617447 - 2617629 | 6737.29 |
| tetraacyldisaccharide 4'-kinase | JYB87_11520 | A9KXE0 | Negative | 2617634 - 2618641 | 37387.4 |
| lipid a export permease/atp-binding protein msba | JYB87_11525 | Q0HHH4 | Negative | 2618642 - 2620450 | 66344.0 |
| dna internalization-related competence protein comec/rec2 | JYB87_11530 | P44408 | Negative | 2620491 - 2622581 | 77374.0 |
| duf2062 domain-containing protein | JYB87_11535 | Not Available | Positive | 2622881 - 2623402 | 19662.5 |
| dead/deah box helicase | JYB87_11540 | P25888 | Positive | 2623666 - 2624922 | 46025.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

