Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | JYB87_10395 | A1S7A4 | Positive | 2353599 - 2353817 | 8232.18 |
| atp-dependent clp protease atp-binding subunit clpa | JYB87_10400 | P0ABI1 | Negative | 2353949 - 2356213 | 83763.2 |
| atp-dependent clp protease adapter clps | JYB87_10405 | A3QD84 | Negative | 2356245 - 2356553 | 11606.0 |
| cold shock domain-containing protein cspd | JYB87_10410 | P0A970 | Positive | 2356956 - 2357162 | 7395.73 |
| nadp-dependent isocitrate dehydrogenase | JYB87_10415 | P41561 | Negative | 2357278 - 2359503 | 79954.6 |
| rrna large subunit pseudouridine synthase e | JYB87_10420 | P44827 | Positive | 2359760 - 2360464 | 26338.8 |
| nudix hydrolase | JYB87_10425 | Q31ZL0 | Positive | 2360489 - 2360959 | 17712.2 |
| trna 2-thiouridine(34) synthase mnma | JYB87_10430 | A3QD79 | Positive | 2361074 - 2362189 | 41437.1 |
| high frequency lysogenization protein hfld | JYB87_10435 | A4Y7M2 | Positive | 2362198 - 2362815 | 23159.1 |
| adenylosuccinate lyase | JYB87_10440 | P0AB90 | Positive | 2362841 - 2364211 | 51001.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

