Shewanella avicenniae FJAT 51800

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella avicenniae FJAT 51800 is characterized by the presence of flagella, which may contribute to its motility and ability to inhabit various aquatic environments. This strain features a single replicon, indicating a streamlined genomic structure that may be advantageous for its adaptability and efficiency in metabolic processes. The genomic data for Shewanella avicenniae FJAT 51800 is cataloged under the accession CP071503.1, which provides a basis for further genomic and functional analyses. As a member of the Shewanella genus, this bacterium is likely to exhibit versatile metabolic capabilities, including the reduction of metals and the degradation of organic compounds, which are critical traits for ecological interactions, particularly in sediment environments. The presence of flagella suggests that Shewanella avicenniae FJAT 51800 can navigate through its environment, allowing it to exploit nutrient sources and engage in interactions with other microorganisms. This motility may facilitate its role in biogeochemical cycles, such as the cycling of carbon and sulfur, which is essential in aquatic ecosystems. Overall, these traits highlight the ecological significance of Shewanella avicenniae FJAT 51800 in its natural habitat, where it may contribute to nutrient recycling and the maintenance of microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella avicenniae
StrainFJAT 51800

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella avicenniae FJAT 51800, Complete Genome

Gene Summary

Adenine Count

1086255 bp

Thymine Count

1087571 bp

Guanine Count

1013547 bp

Cytosine Count

1014309 bp

Genome Length

4201682 bp

Protein-coding Genes

3536 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazole glycerol phosphate synthase subunit hishJYB87_10195A8FWC9Positive2311449 - 231214423993.6
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseJYB87_10200Q083K0Positive2312141 - 231287825995.1
imidazole glycerol phosphate synthase subunit hisfJYB87_10205B0TQY8Positive2312860 - 231365729364.1
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieJYB87_10210Q8EFB6Positive2313696 - 231432223230.6
cell division protein zapcJYB87_10215Q8EDZ9Negative2314459 - 231499220295.6
quinone-dependent dihydroorotate dehydrogenaseJYB87_10220A4Y7I2Negative2315194 - 231621637009.0
nad-glutamate dehydrogenaseJYB87_10225Q9HZE0Negative2316279 - 2321126182599.0
duf2835 domain-containing proteinJYB87_10230Not AvailableNegative2321522 - 23217408411.12
aminopeptidase nJYB87_10235P04825Negative2321740 - 232432896271.7
carboxy terminal-processing peptidaseJYB87_10240P23865Negative2324428 - 232649176810.0

Displaying genes 2141 – 2150 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.