Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | JYB87_09545 | P31882 | Positive | 2164161 - 2165285 | 41391.1 |
| hydrogenase expression/formation protein hype | JYB87_09550 | P24193 | Positive | 2165292 - 2166299 | 35710.0 |
| hydrogenase/urease nickel incorporation protein hypa | JYB87_09555 | B0TVE5 | Positive | 2166299 - 2166646 | 12501.1 |
| bacteriohemerythrin | JYB87_09560 | A5W2C8 | Positive | 2166841 - 2168433 | 59424.6 |
| vrr-nuc domain-containing protein | JYB87_09565 | Q9I2N0 | Negative | 2168436 - 2170091 | 62161.6 |
| peptidylprolyl isomerase | JYB87_09570 | P0A9L7 | Negative | 2170091 - 2170372 | 10492.0 |
| yjbq family protein | JYB87_09575 | P0AF49 | Positive | 2170504 - 2170923 | 15680.6 |
| lyse family translocator | JYB87_09580 | P0AG39 | Negative | 2170969 - 2171607 | 23200.2 |
| arac family transcriptional regulator | JYB87_09585 | O31449 | Negative | 2171659 - 2172513 | 32205.7 |
| rsmb/nop family class i sam-dependent rna methyltransferase | JYB87_09590 | Q7VKC4 | Negative | 2172597 - 2173805 | 44222.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

