Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-dependent hydrogenase large subunit | JYB87_09495 | P31883 | Positive | 2151949 - 2153652 | 63233.6 |
| ni/fe-hydrogenase, b-type cytochrome subunit | JYB87_09500 | P31875 | Positive | 2153663 - 2154331 | 25551.4 |
| hydrogenase small subunit | JYB87_09505 | P31884 | Positive | 2154801 - 2155937 | 40878.8 |
| nickel-dependent hydrogenase large subunit | JYB87_09510 | P31883 | Positive | 2155942 - 2157645 | 62606.1 |
| ni/fe-hydrogenase, b-type cytochrome subunit | JYB87_09515 | P31875 | Positive | 2157657 - 2158328 | 25472.5 |
| hyad/hybd family hydrogenase maturation endopeptidase | JYB87_09520 | P31876 | Positive | 2158336 - 2158935 | 21975.5 |
| nife hydrogenase | JYB87_09525 | P31877 | Positive | 2159030 - 2160736 | 61943.0 |
| carbamoyltransferase hypf | JYB87_09530 | Q55638 | Positive | 2160736 - 2163105 | 86549.9 |
| hydrogenase nickel incorporation protein hypb | JYB87_09535 | Q7VJB8 | Positive | 2163144 - 2163926 | 28693.0 |
| hypc/hybg/hupf family hydrogenase formation chaperone | JYB87_09540 | Q7VJB9 | Positive | 2163926 - 2164168 | 8812.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

