Shewanella avicenniae FJAT 51800

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella avicenniae FJAT 51800 is characterized by the presence of flagella, which may contribute to its motility and ability to inhabit various aquatic environments. This strain features a single replicon, indicating a streamlined genomic structure that may be advantageous for its adaptability and efficiency in metabolic processes. The genomic data for Shewanella avicenniae FJAT 51800 is cataloged under the accession CP071503.1, which provides a basis for further genomic and functional analyses. As a member of the Shewanella genus, this bacterium is likely to exhibit versatile metabolic capabilities, including the reduction of metals and the degradation of organic compounds, which are critical traits for ecological interactions, particularly in sediment environments. The presence of flagella suggests that Shewanella avicenniae FJAT 51800 can navigate through its environment, allowing it to exploit nutrient sources and engage in interactions with other microorganisms. This motility may facilitate its role in biogeochemical cycles, such as the cycling of carbon and sulfur, which is essential in aquatic ecosystems. Overall, these traits highlight the ecological significance of Shewanella avicenniae FJAT 51800 in its natural habitat, where it may contribute to nutrient recycling and the maintenance of microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella avicenniae
StrainFJAT 51800

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella avicenniae FJAT 51800, Complete Genome

Gene Summary

Adenine Count

1086255 bp

Thymine Count

1087571 bp

Guanine Count

1013547 bp

Cytosine Count

1014309 bp

Genome Length

4201682 bp

Protein-coding Genes

3536 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nickel-dependent hydrogenase large subunitJYB87_09495P31883Positive2151949 - 215365263233.6
ni/fe-hydrogenase, b-type cytochrome subunitJYB87_09500P31875Positive2153663 - 215433125551.4
hydrogenase small subunitJYB87_09505P31884Positive2154801 - 215593740878.8
nickel-dependent hydrogenase large subunitJYB87_09510P31883Positive2155942 - 215764562606.1
ni/fe-hydrogenase, b-type cytochrome subunitJYB87_09515P31875Positive2157657 - 215832825472.5
hyad/hybd family hydrogenase maturation endopeptidaseJYB87_09520P31876Positive2158336 - 215893521975.5
nife hydrogenaseJYB87_09525P31877Positive2159030 - 216073661943.0
carbamoyltransferase hypfJYB87_09530Q55638Positive2160736 - 216310586549.9
hydrogenase nickel incorporation protein hypbJYB87_09535Q7VJB8Positive2163144 - 216392628693.0
hypc/hybg/hupf family hydrogenase formation chaperoneJYB87_09540Q7VJB9Positive2163926 - 21641688812.66

Displaying genes 2001 – 2010 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.