Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | JYB87_09445 | Q9P778 | Negative | 2140000 - 2142060 | 76395.5 |
| fumarate hydratase | JYB87_09450 | P14407 | Negative | 2142134 - 2143651 | 54121.8 |
| aminodeoxychorismate synthase component i | JYB87_09455 | P12680 | Positive | 2143898 - 2145325 | 52763.5 |
| coa pyrophosphatase | JYB87_09460 | A4WBH1 | Positive | 2145370 - 2145939 | 20948.4 |
| hypothetical protein | JYB87_09465 | Not Available | Negative | 2145963 - 2146298 | 12588.8 |
| asparagine--trna ligase | JYB87_09470 | Q0HIB6 | Positive | 2146492 - 2147892 | 52523.1 |
| nickel-responsive transcriptional regulator nikr | JYB87_09475 | C0QPW0 | Positive | 2148010 - 2148423 | 15781.9 |
| sensor histidine kinase n-terminal domain-containing protein | JYB87_09480 | Q8ZLZ9 | Negative | 2148453 - 2149832 | 51468.8 |
| response regulator | JYB87_09485 | Q9HV32 | Negative | 2149835 - 2150494 | 24640.9 |
| hydrogenase small subunit | JYB87_09490 | P31884 | Positive | 2150808 - 2151944 | 40763.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

