Shewanella avicenniae FJAT 51800

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella avicenniae FJAT 51800 is characterized by the presence of flagella, which may contribute to its motility and ability to inhabit various aquatic environments. This strain features a single replicon, indicating a streamlined genomic structure that may be advantageous for its adaptability and efficiency in metabolic processes. The genomic data for Shewanella avicenniae FJAT 51800 is cataloged under the accession CP071503.1, which provides a basis for further genomic and functional analyses. As a member of the Shewanella genus, this bacterium is likely to exhibit versatile metabolic capabilities, including the reduction of metals and the degradation of organic compounds, which are critical traits for ecological interactions, particularly in sediment environments. The presence of flagella suggests that Shewanella avicenniae FJAT 51800 can navigate through its environment, allowing it to exploit nutrient sources and engage in interactions with other microorganisms. This motility may facilitate its role in biogeochemical cycles, such as the cycling of carbon and sulfur, which is essential in aquatic ecosystems. Overall, these traits highlight the ecological significance of Shewanella avicenniae FJAT 51800 in its natural habitat, where it may contribute to nutrient recycling and the maintenance of microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella avicenniae
StrainFJAT 51800

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella avicenniae FJAT 51800, Complete Genome

Gene Summary

Adenine Count

1086255 bp

Thymine Count

1087571 bp

Guanine Count

1013547 bp

Cytosine Count

1014309 bp

Genome Length

4201682 bp

Protein-coding Genes

3536 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ketoacid dehydrogenase subunit betaJYB87_09345Q9LDY2Negative2113251 - 211422835620.6
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaJYB87_09350A5A6H9Negative2114231 - 211540943690.9
succinylglutamate desuccinylaseJYB87_09355Q082N5Negative2115549 - 211656237118.6
peptide-methionine (s)-s-oxide reductase msraJYB87_09360A3CUG3Positive2116728 - 211720718027.0
ai-2e family transporterJYB87_09365P0AFJ0Negative2117261 - 211834040238.9
m48 family metallopeptidaseJYB87_09370Q8XAD2Positive2118639 - 212011155162.2
arsenate reductase (glutaredoxin)JYB87_09375P76569Positive2120167 - 212051713091.0
methyl-accepting chemotaxis proteinJYB87_09380Q9Z429Positive2120775 - 212240358690.4
bifunctional acetate--coa ligase family protein/gnat family n-acetyltransferaseJYB87_09385P76594Positive2122519 - 212521897985.2
phosphoethanolamine--lipid a transferaseJYB87_09390P30845Negative2125290 - 212694561938.8

Displaying genes 1971 – 1980 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.