Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JYB87_09045 | Not Available | Negative | 2047319 - 2047660 | 11993.0 |
| aaa family atpase | JYB87_09050 | P94474 | Positive | 2048084 - 2048989 | 33061.1 |
| duf58 domain-containing protein | JYB87_09055 | Not Available | Positive | 2048994 - 2049965 | 36102.8 |
| duf3488 domain-containing protein | JYB87_09060 | Q9HZX3 | Positive | 2049958 - 2051967 | 75981.5 |
| exodeoxyribonuclease v subunit gamma | JYB87_09065 | P07648 | Positive | 2052117 - 2055584 | 130168.0 |
| exodeoxyribonuclease v subunit beta | JYB87_09070 | P08394 | Positive | 2055581 - 2059306 | 138673.0 |
| exodeoxyribonuclease v subunit alpha | JYB87_09075 | P04993 | Positive | 2059306 - 2061321 | 74207.8 |
| d-alanine--d-alanine ligase | JYB87_09080 | Q080C3 | Positive | 2061513 - 2062508 | 37577.4 |
| Trna-leu | Not Available | Not Available | Positive | 2062753 - 2062839 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2062852 - 2062925 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

