Shewanella avicenniae FJAT 51800

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella avicenniae FJAT 51800 is characterized by the presence of flagella, which may contribute to its motility and ability to inhabit various aquatic environments. This strain features a single replicon, indicating a streamlined genomic structure that may be advantageous for its adaptability and efficiency in metabolic processes. The genomic data for Shewanella avicenniae FJAT 51800 is cataloged under the accession CP071503.1, which provides a basis for further genomic and functional analyses. As a member of the Shewanella genus, this bacterium is likely to exhibit versatile metabolic capabilities, including the reduction of metals and the degradation of organic compounds, which are critical traits for ecological interactions, particularly in sediment environments. The presence of flagella suggests that Shewanella avicenniae FJAT 51800 can navigate through its environment, allowing it to exploit nutrient sources and engage in interactions with other microorganisms. This motility may facilitate its role in biogeochemical cycles, such as the cycling of carbon and sulfur, which is essential in aquatic ecosystems. Overall, these traits highlight the ecological significance of Shewanella avicenniae FJAT 51800 in its natural habitat, where it may contribute to nutrient recycling and the maintenance of microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella avicenniae
StrainFJAT 51800

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella avicenniae FJAT 51800, Complete Genome

Gene Summary

Adenine Count

1086255 bp

Thymine Count

1087571 bp

Guanine Count

1013547 bp

Cytosine Count

1014309 bp

Genome Length

4201682 bp

Protein-coding Genes

3536 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
universal stress protein uspeJYB87_08945Q8ZE81Positive2020510 - 202143634236.0
trna 2-thiocytidine(32) synthetase ttcaJYB87_08950Q8EEM4Positive2021514 - 202245535271.6
outer membrane protein assembly factor bamcJYB87_08955A8FW15Negative2022534 - 202364941853.4
4-hydroxy-tetrahydrodipicolinate synthaseJYB87_08960A4Y644Negative2023654 - 202453831210.7
glycine cleavage system transcriptional repressorJYB87_08965P0A9I3Positive2024714 - 202525619865.1
thioredoxin-dependent thiol peroxidaseJYB87_08970P0AE54Positive2025279 - 202575517885.5
asma family proteinJYB87_08975P28249Negative2025885 - 202772364847.8
putative 4-hydroxy-4-methyl-2-oxoglutarate aldolaseJYB87_08980Q8EE23Negative2027758 - 202825217335.1
hypothetical proteinJYB87_08985Not AvailablePositive2028471 - 202878212096.6
abc transporter substrate-binding proteinJYB87_08990P40400Positive2028949 - 202994737729.7

Displaying genes 1891 – 1900 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.