Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspe | JYB87_08945 | Q8ZE81 | Positive | 2020510 - 2021436 | 34236.0 |
| trna 2-thiocytidine(32) synthetase ttca | JYB87_08950 | Q8EEM4 | Positive | 2021514 - 2022455 | 35271.6 |
| outer membrane protein assembly factor bamc | JYB87_08955 | A8FW15 | Negative | 2022534 - 2023649 | 41853.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | JYB87_08960 | A4Y644 | Negative | 2023654 - 2024538 | 31210.7 |
| glycine cleavage system transcriptional repressor | JYB87_08965 | P0A9I3 | Positive | 2024714 - 2025256 | 19865.1 |
| thioredoxin-dependent thiol peroxidase | JYB87_08970 | P0AE54 | Positive | 2025279 - 2025755 | 17885.5 |
| asma family protein | JYB87_08975 | P28249 | Negative | 2025885 - 2027723 | 64847.8 |
| putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | JYB87_08980 | Q8EE23 | Negative | 2027758 - 2028252 | 17335.1 |
| hypothetical protein | JYB87_08985 | Not Available | Positive | 2028471 - 2028782 | 12096.6 |
| abc transporter substrate-binding protein | JYB87_08990 | P40400 | Positive | 2028949 - 2029947 | 37729.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

