Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JYB87_08745 | Not Available | Negative | 1975440 - 1977089 | 61671.0 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | JYB87_08750 | A8FUW3 | Negative | 1977155 - 1978123 | 36789.1 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | JYB87_08755 | Q8EEE7 | Negative | 1978120 - 1978851 | 27230.4 |
| aspartate--trna ligase | JYB87_08760 | A9L3I1 | Positive | 1979141 - 1980925 | 66300.5 |
| yebc/pmpr family dna-binding transcriptional regulator | JYB87_08765 | Q8EEF0 | Positive | 1981013 - 1981759 | 26709.9 |
| crossover junction endodeoxyribonuclease ruvc | JYB87_08770 | A3QEP5 | Positive | 1981766 - 1982287 | 18544.5 |
| holliday junction branch migration protein ruva | JYB87_08775 | Q8EEF2 | Positive | 1982284 - 1982901 | 22332.3 |
| holliday junction branch migration dna helicase ruvb | JYB87_08780 | A0KWL9 | Positive | 1982915 - 1983919 | 37247.1 |
| uracil-xanthine permease | JYB87_08785 | Q9CPL9 | Negative | 1984009 - 1985235 | 42362.5 |
| duf2066 domain-containing protein | JYB87_08790 | Not Available | Positive | 1985448 - 1986548 | 39654.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

