Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-glucose phosphate-specific phosphoglucomutase | JYB87_08595 | P36938 | Positive | 1935827 - 1937479 | 59042.2 |
| pas domain-containing protein | JYB87_08600 | Q9I3F6 | Negative | 1937574 - 1939127 | 56966.4 |
| lysm peptidoglycan-binding domain-containing protein | JYB87_08605 | P0AEZ8 | Negative | 1939285 - 1940817 | 57050.0 |
| hydroxyacylglutathione hydrolase | JYB87_08610 | B0TRL8 | Negative | 1941019 - 1941837 | 30465.3 |
| class i sam-dependent methyltransferase | JYB87_08615 | P75672 | Positive | 1941959 - 1942699 | 28024.8 |
| lysr family transcriptional regulator | JYB87_08620 | P0ACR6 | Positive | 1942700 - 1943614 | 33778.8 |
| ribonuclease hi | JYB87_08625 | A0KXS6 | Negative | 1943611 - 1944081 | 17623.9 |
| dna polymerase iii subunit epsilon | JYB87_08630 | P0A1H0 | Positive | 1944144 - 1944881 | 27172.3 |
| tigr03503 family protein | JYB87_08635 | Not Available | Positive | 1944959 - 1946200 | 46077.9 |
| Trna-asp | Not Available | Not Available | Positive | 1946386 - 1946462 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

