Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate abc transporter substrate-binding protein cysp | JYB87_00345 | P41031 | Negative | 70421 - 71428 | 37018.9 |
| cysteine synthase cysm | JYB87_00350 | Q9I526 | Positive | 71635 - 72519 | 31480.8 |
| grea/greb family elongation factor | JYB87_00355 | Q9KNL7 | Negative | 72580 - 72900 | 12247.7 |
| tyrosine-type recombinase/integrase | JYB87_00360 | P0A053 | Positive | 73063 - 74358 | 50082.0 |
| integrase | JYB87_00365 | Not Available | Positive | 74358 - 78869 | 174817.0 |
| hypothetical protein | JYB87_00370 | Not Available | Positive | 78862 - 79488 | 23429.5 |
| transcription elongation factor greb | JYB87_00375 | Q883T5 | Positive | 79510 - 79992 | 18746.3 |
| dead/deah box helicase family protein | JYB87_00380 | O33011 | Negative | 80128 - 81504 | 51374.9 |
| hypothetical protein | JYB87_00385 | Q9KVG9 | Negative | 81498 - 82034 | 20410.9 |
| helix-turn-helix transcriptional regulator | JYB87_00390 | P96631 | Positive | 82135 - 82455 | 12032.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

