Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25 | JYB87_08295 | A1S615 | Positive | 1856057 - 1856344 | 10673.9 |
| translocation/assembly module tamb domain-containing protein | JYB87_08300 | D2TN57 | Negative | 1856450 - 1860331 | 140005.0 |
| outer membrane protein assembly factor | JYB87_08305 | D2TN56 | Negative | 1860328 - 1862175 | 69060.7 |
| isoaspartyl peptidase/l-asparaginase | JYB87_08310 | Q7CQV5 | Positive | 1862312 - 1863340 | 36209.1 |
| cbs domain-containing protein | JYB87_08315 | Q58622 | Positive | 1863451 - 1863867 | 15321.9 |
| atp-dependent rna helicase hrpa | JYB87_08320 | P45018 | Positive | 1863961 - 1867836 | 147207.0 |
| s8 family serine peptidase | JYB87_08325 | O65351 | Negative | 1867906 - 1871706 | 131392.0 |
| hypothetical protein | JYB87_08330 | Q97DC6 | Negative | 1872176 - 1873129 | 33971.1 |
| duf885 domain-containing protein | JYB87_08335 | Not Available | Negative | 1873434 - 1875155 | 64162.4 |
| aec family transporter | JYB87_08340 | O27435 | Negative | 1875284 - 1876216 | 33406.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

