Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | JYB87_08195 | A1S702 | Positive | 1836525 - 1837505 | 37016.4 |
| phenylalanine--trna ligase subunit beta | JYB87_08200 | Q8EF99 | Positive | 1837521 - 1839908 | 86173.3 |
| integration host factor subunit alpha | JYB87_08205 | A3QF32 | Positive | 1839912 - 1840208 | 11056.3 |
| Trna-met | Not Available | Not Available | Positive | 1840471 - 1840547 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1840576 - 1840652 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1840676 - 1840752 | Not Available |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | JYB87_08225 | A4Y5X4 | Positive | 1840976 - 1843108 | 79793.2 |
| abc transporter atp-binding protein | JYB87_08230 | Q57242 | Positive | 1843153 - 1845069 | 71996.5 |
| duf3466 family protein | JYB87_08235 | Not Available | Positive | 1845098 - 1846951 | 66806.5 |
| ribosome modulation factor | JYB87_08240 | A1S605 | Positive | 1847328 - 1847504 | 6592.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

