Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yccf domain-containing protein | JYB87_07295 | P0AB12 | Negative | 1662010 - 1662426 | 15194.2 |
| pyridoxal-phosphate dependent enzyme | JYB87_07300 | A1L4V7 | Positive | 1662633 - 1663547 | 34086.1 |
| hypothetical protein | JYB87_07305 | Not Available | Negative | 1663551 - 1663820 | 9949.35 |
| hypothetical protein | JYB87_07310 | Not Available | Negative | 1664120 - 1664293 | 6480.79 |
| cupin domain-containing protein | JYB87_07315 | P40685 | Negative | 1664560 - 1665225 | 24059.6 |
| sigma-70 family rna polymerase sigma factor | JYB87_07320 | Q3IYV6 | Negative | 1665218 - 1665829 | 23297.1 |
| lon peptidase substrate-binding domain-containing protein | JYB87_07325 | Q5H432 | Negative | 1665984 - 1666541 | 21394.9 |
| class i sam-dependent methyltransferase | JYB87_07330 | A0QUV5 | Positive | 1666679 - 1667293 | 23014.9 |
| lipocalin family protein | JYB87_07335 | Q46036 | Negative | 1667312 - 1667854 | 20381.3 |
| chemotaxis protein chev | JYB87_07340 | O25154 | Positive | 1668048 - 1668989 | 34917.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

