Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01620 family protein | JYB87_06745 | Q8EG03 | Positive | 1524091 - 1525143 | 39529.5 |
| helix-hairpin-helix domain-containing protein | JYB87_06750 | P0AAR8 | Positive | 1525223 - 1525570 | 12111.7 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 1525734 - 1525830 | Not Available |
| late competence development comfb family protein | JYB87_06760 | Not Available | Negative | 1525861 - 1526133 | 10663.6 |
| histone deacetylase | JYB87_06765 | P28606 | Negative | 1526148 - 1526972 | 30175.3 |
| duf2057 domain-containing protein | JYB87_06770 | Q8EFZ8 | Negative | 1527060 - 1527746 | 24665.2 |
| primosomal replication protein | JYB87_06775 | Not Available | Negative | 1527763 - 1528419 | 25511.9 |
| sulfite exporter taue/safe family protein | JYB87_06780 | P29942 | Negative | 1528416 - 1529186 | 27718.8 |
| atp-dependent dna helicase ding | JYB87_06785 | P29741 | Negative | 1529199 - 1531271 | 77371.4 |
| dna polymerase ii | JYB87_06790 | P21189 | Positive | 1531359 - 1533737 | 89026.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

