Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | JYB87_06345 | P43989 | Positive | 1434412 - 1435032 | 21792.6 |
| outer membrane protein assembly factor bamb | JYB87_06350 | Q8EC35 | Positive | 1435043 - 1436227 | 42517.0 |
| ribosome biogenesis gtpase der | JYB87_06355 | A1RHQ7 | Positive | 1436307 - 1437773 | 54164.6 |
| exodeoxyribonuclease vii large subunit | JYB87_06360 | A1S858 | Negative | 1437860 - 1439200 | 50281.4 |
| imp dehydrogenase | JYB87_06365 | P44334 | Positive | 1439331 - 1440797 | 51804.8 |
| glutamine-hydrolyzing gmp synthase | JYB87_06370 | A1S856 | Positive | 1440890 - 1442467 | 58036.6 |
| duf1415 domain-containing protein | JYB87_06375 | Not Available | Positive | 1442724 - 1443290 | 21545.3 |
| trna adenosine(34) deaminase tada | JYB87_06380 | Q8XGY4 | Positive | 1443442 - 1444002 | 20333.3 |
| hypothetical protein | JYB87_06385 | Not Available | Positive | 1443986 - 1444195 | 7398.89 |
| membrane-bound lytic murein transglycosylase mltf | JYB87_06390 | A1S850 | Negative | 1444197 - 1445636 | 54531.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

