Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | JYB87_00095 | B8CHB1 | Negative | 22298 - 23251 | 34087.0 |
| peptide deformylase | JYB87_00100 | Q8EKQ8 | Negative | 23276 - 23788 | 19227.1 |
| lysm peptidoglycan-binding domain-containing protein | JYB87_00105 | P54335 | Positive | 23917 - 25011 | 39717.0 |
| dna-processing protein dpra | JYB87_00110 | P30852 | Positive | 25095 - 26108 | 36218.6 |
| duf494 domain-containing protein | JYB87_00115 | A3QJF1 | Positive | 26111 - 26584 | 18338.9 |
| topoisomerase dna-binding c4 zinc finger domain-containing protein | JYB87_00120 | P45771 | Positive | 26737 - 27300 | 21089.2 |
| threonylcarbamoyl-amp synthase | JYB87_00125 | Q12TA0 | Positive | 27390 - 27953 | 20227.3 |
| oxygen-dependent coproporphyrinogen oxidase | JYB87_00130 | A0KR67 | Positive | 27970 - 28881 | 34544.6 |
| group ii truncated hemoglobin | JYB87_00135 | O31607 | Negative | 28911 - 29342 | 16363.7 |
| shikimate dehydrogenase | JYB87_00140 | A6WHB9 | Positive | 29494 - 30330 | 29702.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

