Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | JYB87_05845 | A1S8C4 | Positive | 1319159 - 1320226 | 40417.7 |
| hypothetical protein | JYB87_05850 | Not Available | Negative | 1320381 - 1320728 | 13135.9 |
| isocitrate dehydrogenase | JYB87_05855 | Q945K7 | Negative | 1320857 - 1321864 | 35843.2 |
| prolyl oligopeptidase family serine peptidase | JYB87_05860 | P39839 | Positive | 1322145 - 1324946 | 104972.0 |
| yjag family protein | JYB87_05865 | P0A1U5 | Negative | 1325063 - 1325668 | 22626.1 |
| two-component sensor histidine kinase bara | JYB87_05870 | P59342 | Negative | 1325681 - 1328446 | 102434.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | JYB87_05875 | Q0HXI0 | Positive | 1328541 - 1329893 | 49453.6 |
| gtp diphosphokinase | JYB87_05880 | P0AG22 | Positive | 1330041 - 1332254 | 83914.9 |
| nucleoside triphosphate pyrophosphohydrolase | JYB87_05885 | P0AEY4 | Positive | 1332270 - 1333076 | 30724.3 |
| ctp synthase | JYB87_05890 | A3QC76 | Positive | 1333215 - 1334852 | 59912.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

