Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly pilx n-terminal domain-containing protein | JYB87_05745 | Not Available | Positive | 1295841 - 1296320 | 16902.5 |
| type iv pilin biogenesis protein | JYB87_05750 | Q9HVM8 | Positive | 1296324 - 1299914 | 129227.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | JYB87_05755 | G3XD43 | Positive | 1299925 - 1300311 | 14108.9 |
| tapy2 family type iva secretion system protein | JYB87_05760 | Not Available | Positive | 1300311 - 1300607 | 10917.2 |
| lysophospholipid acyltransferase family protein | JYB87_05765 | Q7D1N1 | Negative | 1300785 - 1302497 | 64872.3 |
| yjih family protein | JYB87_05770 | P30267 | Negative | 1302680 - 1303960 | 45964.5 |
| duf998 domain-containing protein | JYB87_05775 | Not Available | Positive | 1304440 - 1305123 | 25293.7 |
| u32 family peptidase | JYB87_05780 | P45475 | Negative | 1305154 - 1306005 | 31786.6 |
| u32 family peptidase | JYB87_05785 | P45527 | Negative | 1306019 - 1307020 | 36853.6 |
| scp2 sterol-binding domain-containing protein | JYB87_05790 | P64601 | Positive | 1307154 - 1307681 | 19497.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

