Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail fiber | JYB87_12825 | Q6XQB2 | Positive | 2877581 - 2878903 | 46516.7 |
| Dna adenine methylase | JYB87_12830 | Q01511 | Positive | 2879048 - 2879809 | 29310.4 |
| chromosomal replication initiator protein dnaa | JYB87_00005 | A3Q8S6 | Positive | 1 - 1380 | 51853.2 |
| dna polymerase iii subunit beta | JYB87_00010 | P26464 | Positive | 1397 - 2497 | 40565.6 |
| dna replication/repair protein recf | JYB87_00015 | A8GYE5 | Positive | 2513 - 3598 | 41266.8 |
| dna topoisomerase (atp-hydrolyzing) subunit b | JYB87_00020 | O51859 | Positive | 3615 - 6032 | 89941.8 |
| glycine--trna ligase subunit beta | JYB87_00025 | Q12TC1 | Negative | 6180 - 8249 | 74879.0 |
| glycine--trna ligase subunit alpha | JYB87_00030 | A1S1I2 | Negative | 8261 - 9166 | 34266.7 |
| dna-3-methyladenine glycosylase i | JYB87_00035 | P44321 | Positive | 9273 - 9860 | 22045.2 |
| sulfurtransferase tusa | JYB87_00040 | B8CH81 | Negative | 10379 - 10630 | 9360.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

