Shewanella sedimentimangrovi FJAT 52962

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella sedimentimangrovi FJAT 52962 is a notable bacterium characterized by the presence of flagella, which are essential for its motility. This motility may enhance its ability to navigate through various environments, potentially allowing it to interact with different substrates and microorganisms in its habitat. The strain has a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptation to its ecological niche. The genomic data for Shewanella sedimentimangrovi FJAT 52962 can be accessed under the accession number CP071502.1, providing researchers with a resource for further study of its genetic makeup and functional capabilities. Shewanella species are known for their versatile metabolic pathways, particularly in anaerobic environments. This versatility may allow Shewanella sedimentimangrovi FJAT 52962 to play a significant role in biogeochemical cycles, such as the reduction of metals and organic matter in sedimentary ecosystems. The presence of flagella suggests that motility could contribute to the bacterium's ecological functions, allowing it to colonize various niches within mangrove sediments. Thus, the study of Shewanella sedimentimangrovi FJAT 52962 may provide insights into microbial dynamics and nutrient cycling in mangrove ecosystems, highlighting the importance of motile bacteria in these unique environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella sedimentimangrovi
StrainFJAT 52962

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella sedimentimangrovi FJAT 52962, Complete Genome

Gene Summary

Adenine Count

947310 bp

Thymine Count

946428 bp

Guanine Count

1173347 bp

Cytosine Count

1175272 bp

Genome Length

4242357 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeJYB85_16855P0AFG9Negative3773865 - 377652898911.0
pyruvate dehydrogenase complex transcriptional repressor pdhrJYB85_16860P0ACM1Negative3776605 - 377735728471.3
beta-lactamase regulator ampeJYB85_16865P0AE14Negative3777538 - 377841331748.2
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdJYB85_16870E1W818Negative3778448 - 377900220580.2
carboxylating nicotinate-nucleotide diphosphorylaseJYB85_16875P30012Positive3779215 - 378007230810.0
prepilin-type n-terminal cleavage/methylation domain-containing proteinJYB85_16880P04739Positive3780977 - 378137513397.3
type iv-a pilus assembly atpase pilbJYB85_16885P45792Positive3781461 - 378317063043.1
type ii secretion system f family proteinJYB85_16890P45793Positive3783209 - 378447746060.3
prepilin peptidaseJYB85_16895A2T195Positive3784503 - 378541733931.2
dephospho-coa kinaseJYB85_16900Q8EJP9Positive3785426 - 378603122183.8

Displaying genes 3371 – 3380 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.