Shewanella sedimentimangrovi FJAT 52962

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella sedimentimangrovi FJAT 52962 is a notable bacterium characterized by the presence of flagella, which are essential for its motility. This motility may enhance its ability to navigate through various environments, potentially allowing it to interact with different substrates and microorganisms in its habitat. The strain has a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptation to its ecological niche. The genomic data for Shewanella sedimentimangrovi FJAT 52962 can be accessed under the accession number CP071502.1, providing researchers with a resource for further study of its genetic makeup and functional capabilities. Shewanella species are known for their versatile metabolic pathways, particularly in anaerobic environments. This versatility may allow Shewanella sedimentimangrovi FJAT 52962 to play a significant role in biogeochemical cycles, such as the reduction of metals and organic matter in sedimentary ecosystems. The presence of flagella suggests that motility could contribute to the bacterium's ecological functions, allowing it to colonize various niches within mangrove sediments. Thus, the study of Shewanella sedimentimangrovi FJAT 52962 may provide insights into microbial dynamics and nutrient cycling in mangrove ecosystems, highlighting the importance of motile bacteria in these unique environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella sedimentimangrovi
StrainFJAT 52962

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella sedimentimangrovi FJAT 52962, Complete Genome

Gene Summary

Adenine Count

947310 bp

Thymine Count

946428 bp

Guanine Count

1173347 bp

Cytosine Count

1175272 bp

Genome Length

4242357 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-f crispr-associated endonuclease cas1JYB85_01555Q6D0X0Positive375944 - 37692135650.8
type i-f crispr-associated helicase cas3JYB85_01560Q6D0W9Positive376918 - 380241124734.0
type i-f crispr-associated protein csy1JYB85_01565Q6D0W8Positive380234 - 38142744770.2
type i-f crispr-associated protein csy2JYB85_01570Q6D0W7Positive381424 - 38238336060.9
type i-f crispr-associated protein csy3JYB85_01575Q6D0W6Positive382409 - 38344038125.4
type i-f crispr-associated endoribonuclease cas6/csy4JYB85_01580Q6D0W5Positive383450 - 38400120633.1
inovirus-type gp2 proteinJYB85_01585Not AvailableNegative390264 - 39113633096.5
alpa family phage regulatory proteinJYB85_01590P12552Negative391358 - 3915648183.07
alpa family phage regulatory proteinJYB85_01595P12552Negative391545 - 3917848907.61
hypothetical proteinJYB85_01600Not AvailableNegative391900 - 39273330223.4

Displaying genes 311 – 320 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.