Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sedimentimangrovi |
| Strain | FJAT 52962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
947310 bp
Thymine Count
946428 bp
Guanine Count
1173347 bp
Cytosine Count
1175272 bp
Genome Length
4242357 bp
Protein-coding Genes
3651 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate binding domain-containing protein | JYB85_15855 | P43011 | Positive | 3550545 - 3551204 | 24462.7 |
| dna-binding response regulator | JYB85_15860 | Not Available | Negative | 3551357 - 3551848 | 18097.2 |
| cytochrome b/b6 domain-containing protein | JYB85_15865 | P21960 | Positive | 3552083 - 3552715 | 23423.2 |
| nyn domain-containing protein | JYB85_15870 | Q57905 | Positive | 3554080 - 3554907 | 30386.4 |
| rna-directed dna polymerase | JYB85_15875 | Not Available | Positive | 3554967 - 3556121 | 44696.3 |
| rna-directed dna polymerase | JYB85_15880 | Not Available | Positive | 3556090 - 3558093 | 78069.5 |
| chaperonin groel | JYB85_15885 | Q8CX48 | Negative | 3558779 - 3560419 | 57291.4 |
| co-chaperone groes | JYB85_15890 | A1SAC1 | Negative | 3560476 - 3560766 | 10316.5 |
| hypothetical protein | JYB85_15895 | Not Available | Positive | 3560751 - 3561044 | 10552.8 |
| mate family efflux transporter | JYB85_15900 | Q8EIX5 | Positive | 3561064 - 3562440 | 48396.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

