Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sedimentimangrovi |
| Strain | FJAT 52962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
947310 bp
Thymine Count
946428 bp
Guanine Count
1173347 bp
Cytosine Count
1175272 bp
Genome Length
4242357 bp
Protein-coding Genes
3651 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 84): tatagttgcaaacgacga | Not Available | Not Available | Positive | 2882668 - 2883023 | Not Available |
| tyrosine-type recombinase/integrase | JYB85_12610 | P32053 | Positive | 2883188 - 2884426 | 47004.6 |
| tir domain-containing protein | JYB85_12615 | A0A5B8Z670 | Negative | 2884643 - 2885320 | 26212.5 |
| sir2 family protein | JYB85_12620 | J8G6Z1 | Negative | 2885345 - 2886772 | 53984.1 |
| type i restriction endonuclease subunit r | JYB85_12625 | Q60295 | Negative | 2886781 - 2890116 | 129069.0 |
| restriction endonuclease subunit s | JYB85_12630 | Q60296 | Negative | 2890129 - 2891322 | 44965.0 |
| sam-dependent dna methyltransferase | JYB85_12635 | Q60297 | Negative | 2891319 - 2893412 | 79504.3 |
| helix-turn-helix domain-containing protein | JYB85_12640 | P9WKT6 | Negative | 2893500 - 2893673 | 6580.94 |
| recombinase family protein | JYB85_12645 | P05823 | Negative | 2893772 - 2894350 | 21391.0 |
| tyrosine-type recombinase/integrase | JYB85_12650 | Q9KA25 | Negative | 2894516 - 2895619 | 42377.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

