Shewanella sedimentimangrovi FJAT 52962

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella sedimentimangrovi FJAT 52962 is a notable bacterium characterized by the presence of flagella, which are essential for its motility. This motility may enhance its ability to navigate through various environments, potentially allowing it to interact with different substrates and microorganisms in its habitat. The strain has a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptation to its ecological niche. The genomic data for Shewanella sedimentimangrovi FJAT 52962 can be accessed under the accession number CP071502.1, providing researchers with a resource for further study of its genetic makeup and functional capabilities. Shewanella species are known for their versatile metabolic pathways, particularly in anaerobic environments. This versatility may allow Shewanella sedimentimangrovi FJAT 52962 to play a significant role in biogeochemical cycles, such as the reduction of metals and organic matter in sedimentary ecosystems. The presence of flagella suggests that motility could contribute to the bacterium's ecological functions, allowing it to colonize various niches within mangrove sediments. Thus, the study of Shewanella sedimentimangrovi FJAT 52962 may provide insights into microbial dynamics and nutrient cycling in mangrove ecosystems, highlighting the importance of motile bacteria in these unique environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella sedimentimangrovi
StrainFJAT 52962

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella sedimentimangrovi FJAT 52962, Complete Genome

Gene Summary

Adenine Count

947310 bp

Thymine Count

946428 bp

Guanine Count

1173347 bp

Cytosine Count

1175272 bp

Genome Length

4242357 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudaminic acid biosynthesis-associated methylaseJYB85_12305Not AvailableNegative2816697 - 281731423824.4
pseudaminic acid synthaseJYB85_12310Q939J8Negative2817340 - 281838938408.7
udp-glucuronic acid dehydrogenaseJYB85_12315B4ETL7Negative2818389 - 281903625081.8
udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolaseJYB85_12320Q0P8U5Negative2819029 - 282008738939.3
pseudaminic acid cytidylyltransferaseJYB85_12325Q0P8U6Negative2820092 - 282077225578.7
pseudaminic acid cytidylyltransferaseJYB85_12330Q0P8U6Negative2821114 - 282183326723.7
udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminaseJYB85_12335P39623Negative2821878 - 282302941714.0
udp-n-acetylglucosamine 4,6-dehydratase (inverting)JYB85_12340Q0P8W4Negative2823026 - 282402136711.2
duf115 domain-containing proteinJYB85_12345O83205Positive2824408 - 282691294145.3
duf2947 domain-containing proteinJYB85_12350Not AvailablePositive2827059 - 282753818965.2

Displaying genes 2461 – 2470 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.