Shewanella sedimentimangrovi FJAT 52962

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella sedimentimangrovi FJAT 52962 is a notable bacterium characterized by the presence of flagella, which are essential for its motility. This motility may enhance its ability to navigate through various environments, potentially allowing it to interact with different substrates and microorganisms in its habitat. The strain has a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptation to its ecological niche. The genomic data for Shewanella sedimentimangrovi FJAT 52962 can be accessed under the accession number CP071502.1, providing researchers with a resource for further study of its genetic makeup and functional capabilities. Shewanella species are known for their versatile metabolic pathways, particularly in anaerobic environments. This versatility may allow Shewanella sedimentimangrovi FJAT 52962 to play a significant role in biogeochemical cycles, such as the reduction of metals and organic matter in sedimentary ecosystems. The presence of flagella suggests that motility could contribute to the bacterium's ecological functions, allowing it to colonize various niches within mangrove sediments. Thus, the study of Shewanella sedimentimangrovi FJAT 52962 may provide insights into microbial dynamics and nutrient cycling in mangrove ecosystems, highlighting the importance of motile bacteria in these unique environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella sedimentimangrovi
StrainFJAT 52962

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella sedimentimangrovi FJAT 52962, Complete Genome

Gene Summary

Adenine Count

947310 bp

Thymine Count

946428 bp

Guanine Count

1173347 bp

Cytosine Count

1175272 bp

Genome Length

4242357 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secfJYB85_11505E9RGS4Negative2648483 - 264943034261.3
protein translocase subunit secdJYB85_11510E9RGS3Negative2649444 - 265129466862.0
preprotein translocase subunit yajcJYB85_11515P0ADZ9Negative2651312 - 265164111738.5
trna guanosine(34) transglycosylase tgtJYB85_11520A3QFF5Negative2651670 - 265279442683.0
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaJYB85_11525A1S7P3Negative2652945 - 265398238336.3
hypothetical proteinJYB85_11530Not AvailableNegative2654032 - 26541876145.41
duf479 domain-containing proteinJYB85_11535A7FLF7Positive2654336 - 265492922398.9
rlua family pseudouridine synthaseJYB85_11540Q87LD3Positive2654997 - 265567725520.7
hypothetical proteinJYB85_11545Not AvailableNegative2655842 - 265625815629.4
is200/is605 family transposaseJYB85_11550P59697Negative2656546 - 265699217747.6

Displaying genes 2301 – 2310 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.