Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sedimentimangrovi |
| Strain | FJAT 52962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
947310 bp
Thymine Count
946428 bp
Guanine Count
1173347 bp
Cytosine Count
1175272 bp
Genome Length
4242357 bp
Protein-coding Genes
3651 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase, b-type cytochrome subunit | JYB85_09505 | P31875 | Positive | 2187459 - 2188133 | 25616.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | JYB85_09510 | P31876 | Positive | 2188168 - 2188725 | 20830.3 |
| hypothetical protein | JYB85_09515 | P31877 | Positive | 2188712 - 2190478 | 64111.0 |
| carbamoyltransferase hypf | JYB85_09520 | Q55638 | Positive | 2190475 - 2192811 | 84631.7 |
| hydrogenase nickel incorporation protein hypb | JYB85_09525 | Q7VJB8 | Positive | 2192886 - 2193653 | 28264.7 |
| hypc/hybg/hupf family hydrogenase formation chaperone | JYB85_09530 | Q7VJB9 | Positive | 2193653 - 2193898 | 8889.69 |
| hydrogenase formation protein hypd | JYB85_09535 | P31882 | Positive | 2193891 - 2195018 | 40966.7 |
| hydrogenase expression/formation protein hype | JYB85_09540 | P26412 | Positive | 2195008 - 2196030 | 35898.5 |
| hydrogenase maturation nickel metallochaperone hypa | JYB85_09545 | A6WMK8 | Positive | 2196030 - 2196404 | 13144.8 |
| vrr-nuc domain-containing protein | JYB85_09550 | Q9I2N0 | Negative | 2196382 - 2198058 | 63332.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

