Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sedimentimangrovi |
| Strain | FJAT 52962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
947310 bp
Thymine Count
946428 bp
Guanine Count
1173347 bp
Cytosine Count
1175272 bp
Genome Length
4242357 bp
Protein-coding Genes
3651 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | JYB85_09155 | A8FVN0 | Negative | 2106829 - 2107530 | 25008.6 |
| lipopolysaccharide assembly protein lapb | JYB85_09160 | P0AB60 | Negative | 2107571 - 2108731 | 43990.1 |
| lapa family protein | JYB85_09165 | P0ACV4 | Negative | 2108733 - 2109029 | 10812.7 |
| integration host factor subunit beta | JYB85_09170 | Q8EEI1 | Negative | 2109154 - 2109441 | 10664.8 |
| 30s ribosomal protein s1 | JYB85_09175 | P0AG69 | Negative | 2109517 - 2111184 | 61186.4 |
| (d)cmp kinase | JYB85_09180 | A1S6D4 | Negative | 2111287 - 2111982 | 25096.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | JYB85_09185 | A1S6D3 | Negative | 2112139 - 2113422 | 45842.5 |
| aspartate/tyrosine/aromatic aminotransferase | JYB85_09190 | P58661 | Positive | 2113844 - 2115034 | 43122.7 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | JYB85_09195 | A1S6D1 | Negative | 2115124 - 2116215 | 39940.3 |
| dna topoisomerase (atp-hydrolyzing) subunit a | JYB85_09200 | P41513 | Negative | 2116299 - 2119004 | 99407.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

