Shewanella sedimentimangrovi FJAT 52962

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella sedimentimangrovi FJAT 52962 is a notable bacterium characterized by the presence of flagella, which are essential for its motility. This motility may enhance its ability to navigate through various environments, potentially allowing it to interact with different substrates and microorganisms in its habitat. The strain has a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and adaptation to its ecological niche. The genomic data for Shewanella sedimentimangrovi FJAT 52962 can be accessed under the accession number CP071502.1, providing researchers with a resource for further study of its genetic makeup and functional capabilities. Shewanella species are known for their versatile metabolic pathways, particularly in anaerobic environments. This versatility may allow Shewanella sedimentimangrovi FJAT 52962 to play a significant role in biogeochemical cycles, such as the reduction of metals and organic matter in sedimentary ecosystems. The presence of flagella suggests that motility could contribute to the bacterium's ecological functions, allowing it to colonize various niches within mangrove sediments. Thus, the study of Shewanella sedimentimangrovi FJAT 52962 may provide insights into microbial dynamics and nutrient cycling in mangrove ecosystems, highlighting the importance of motile bacteria in these unique environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella sedimentimangrovi
StrainFJAT 52962

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella sedimentimangrovi FJAT 52962, Complete Genome

Gene Summary

Adenine Count

947310 bp

Thymine Count

946428 bp

Guanine Count

1173347 bp

Cytosine Count

1175272 bp

Genome Length

4242357 bp

Protein-coding Genes

3651 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acylphosphataseJYB85_07055A1S579Positive1659560 - 165983510063.1
peptidoglycan binding protein csivJYB85_07060Not AvailableNegative1659888 - 166100641152.4
transcription-repair coupling factorJYB85_07065P30958Negative1661003 - 1664470129328.0
hypothetical proteinJYB85_07070Not AvailableNegative1664554 - 166512020950.2
lipoprotein-releasing abc transporter permease subunitJYB85_07075P0ADC5Positive1665215 - 166644743967.2
lipoprotein-releasing abc transporter atp-binding protein loldJYB85_07080Q0HVQ0Positive1666586 - 166727524798.8
lipoprotein-releasing abc transporter permease subunit loleJYB85_07085P75958Positive1667290 - 166854045022.4
duf2062 domain-containing proteinJYB85_07090Not AvailableNegative1668653 - 166915919174.1
dna internalization-related competence protein comec/rec2JYB85_07095P37443Positive1669189 - 167147483466.6
lipid a export permease/atp-binding protein msbaJYB85_07100Q0HHH4Positive1671508 - 167331065872.0

Displaying genes 1411 – 1420 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.