Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 5-hydroxyuridine modification protein yegq | JYB84_04605 | P76403 | Negative | 1088759 - 1090150 | 51744.4 |
| hdod domain-containing protein | JYB84_04610 | O83112 | Positive | 1090428 - 1091270 | 30932.4 |
| bifunctional diguanylate cyclase/phosphodiesterase | JYB84_04615 | P55552 | Positive | 1091324 - 1092808 | 55488.8 |
| thioesterase | JYB84_04620 | P44679 | Negative | 1092818 - 1093255 | 16907.3 |
| transporter substrate-binding domain-containing protein | JYB84_04625 | Not Available | Negative | 1093319 - 1094068 | 27487.2 |
| hd-gyp domain-containing protein | JYB84_04630 | Q9HWS0 | Positive | 1094353 - 1095624 | 46734.6 |
| energy-dependent translational throttle protein etta | JYB84_04635 | P45127 | Negative | 1095715 - 1097382 | 62353.1 |
| serine hydroxymethyltransferase | JYB84_04640 | A1S4B5 | Positive | 1097607 - 1098860 | 45338.4 |
| transcriptional regulator nrdr | JYB84_04645 | A1S4B6 | Positive | 1098964 - 1099416 | 17240.8 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | JYB84_04650 | P25539 | Positive | 1099448 - 1100575 | 40308.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

