Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | JYB84_03955 | A1S3W9 | Positive | 946315 - 947490 | 41462.3 |
| transcriptional activator nhar | JYB84_03960 | P0A9G2 | Positive | 947493 - 948395 | 33962.2 |
| succinate dehydrogenase assembly factor 2 | JYB84_03965 | Q8EH90 | Positive | 948480 - 948719 | 9126.12 |
| hypothetical protein | JYB84_03970 | Not Available | Positive | 948700 - 949149 | 17431.4 |
| l-aspartate oxidase | JYB84_03975 | Q9KPA4 | Negative | 949190 - 950791 | 58957.1 |
| rna polymerase sigma factor rpoe | JYB84_03980 | P0AGB8 | Positive | 950978 - 951556 | 21894.0 |
| anti-sigma factor | JYB84_03985 | P0AFX8 | Positive | 951612 - 952184 | 20582.3 |
| mucb/rseb c-terminal domain-containing protein | JYB84_03990 | P44792 | Positive | 952195 - 953133 | 34825.3 |
| soxr reducing system rsec family protein | JYB84_03995 | P44060 | Positive | 953130 - 953600 | 16176.7 |
| elongation factor 4 | JYB84_04000 | A1S3X9 | Positive | 953707 - 955497 | 66017.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

