Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carotenoid 1,2-hydratase | JYB84_03105 | Not Available | Negative | 755087 - 756205 | 41602.8 |
| abc transporter permease | JYB84_03110 | O53900 | Negative | 756205 - 758769 | 91811.9 |
| abc transporter atp-binding protein | JYB84_03115 | Q12ES3 | Negative | 758762 - 759493 | 26382.4 |
| lysr family transcriptional regulator | JYB84_03120 | P0A9F8 | Negative | 759551 - 760438 | 32858.6 |
| pas domain s-box protein | JYB84_03125 | P59342 | Positive | 760931 - 766228 | 196096.0 |
| two-component system response regulator | JYB84_03130 | Q9KSB1 | Positive | 766215 - 767246 | 38472.6 |
| pp_00597 | JYB84_03135 | Not Available | Negative | 767305 - 768267 | Not Available |
| phosphoglycerate dehydrogenase | JYB84_03140 | P0A9T2 | Negative | 768408 - 769637 | 44327.6 |
| duf2238 domain-containing protein | JYB84_03145 | P39270 | Positive | 769800 - 770399 | 22627.1 |
| response regulator transcription factor | JYB84_03150 | O54294 | Positive | 770652 - 771311 | 24695.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

