Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | JYB84_18355 | P52692 | Negative | 4125928 - 4126830 | 33581.4 |
| nadh-quinone oxidoreductase subunit l | JYB84_18360 | Q31HC4 | Positive | 4126946 - 4128481 | 55992.5 |
| duf2309 domain-containing protein | JYB84_18365 | Q9KRQ4 | Positive | 4128478 - 4130922 | 90447.8 |
| threonylcarbamoyl-amp synthase | JYB84_18370 | P39153 | Positive | 4131011 - 4131997 | 34830.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | JYB84_18375 | A1S1G4 | Negative | 4132124 - 4133485 | 48869.3 |
| membrane protein insertase yidc | JYB84_18380 | Q0HPE6 | Negative | 4133561 - 4135186 | 60524.1 |
| membrane protein insertion efficiency factor yidd | JYB84_18385 | Q8EKT5 | Negative | 4135190 - 4135444 | 9362.52 |
| ribonuclease p protein component | JYB84_18390 | A4YCM4 | Negative | 4135411 - 4135767 | 13771.0 |
| 50s ribosomal protein l34 | JYB84_18395 | A1S1G8 | Negative | 4135786 - 4135923 | 5182.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

