Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | JYB84_18005 | P72131 | Negative | 4052906 - 4053823 | 34256.4 |
| nad(p)h-binding protein | JYB84_18010 | P39315 | Positive | 4053935 - 4054786 | 30056.0 |
| dna-3-methyladenine glycosylase i | JYB84_18015 | P05100 | Positive | 4054851 - 4055540 | 25553.5 |
| efflux rnd transporter periplasmic adaptor subunit | JYB84_18020 | P0AE07 | Positive | 4055762 - 4056910 | 40460.2 |
| efflux rnd transporter permease subunit | JYB84_18025 | P31224 | Positive | 4056926 - 4060087 | 113537.0 |
| lema family protein | JYB84_18030 | A8AVK0 | Positive | 4060625 - 4061194 | 20933.3 |
| lytic transglycosylase domain-containing protein | JYB84_18035 | O31608 | Positive | 4061479 - 4061982 | 18860.8 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | JYB84_18040 | P37634 | Negative | 4061985 - 4062839 | 31832.1 |
| class i sam-dependent methyltransferase | JYB84_18045 | A1SBL0 | Positive | 4062875 - 4063720 | 30603.1 |
| eama family transporter | JYB84_18050 | P42194 | Negative | 4063722 - 4064606 | 31755.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

