Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choice-of-anchor h family protein | JYB84_16855 | Not Available | Negative | 3812567 - 3813361 | 29364.3 |
| pepsy domain-containing protein | JYB84_16860 | Not Available | Positive | 3813581 - 3813889 | 10829.3 |
| response regulator transcription factor | JYB84_16865 | Q9I4F9 | Positive | 3813891 - 3814580 | 25424.3 |
| ghkl domain-containing protein | JYB84_16870 | Q9I4F8 | Positive | 3814561 - 3815922 | 50035.3 |
| response regulator transcription factor | JYB84_16875 | Q82Z76 | Negative | 3816660 - 3817418 | 28771.8 |
| histidine kinase | JYB84_16880 | Q8CR79 | Negative | 3817363 - 3818442 | 40195.6 |
| alpha/beta fold hydrolase | JYB84_16885 | Q9WYH1 | Negative | 3818439 - 3819881 | 51659.4 |
| helix-turn-helix transcriptional regulator | JYB84_16890 | O31943 | Positive | 3820270 - 3821250 | 36387.9 |
| duf3300 domain-containing protein | JYB84_16895 | P36682 | Positive | 3821607 - 3822956 | 52923.7 |
| class i sam-dependent methyltransferase | JYB84_16900 | Q55423 | Positive | 3823021 - 3823662 | 23909.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

