Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd family hydrolase | JYB84_16355 | B2VG45 | Positive | 3672253 - 3673056 | 29310.9 |
| diguanylate cyclase | JYB84_16360 | Q55434 | Positive | 3673049 - 3674920 | 70126.6 |
| porphobilinogen synthase | JYB84_16365 | Q59643 | Positive | 3674935 - 3675945 | 37110.8 |
| thioredoxin family protein | JYB84_16370 | Q8VWG7 | Positive | 3676079 - 3676477 | 14646.5 |
| tonb-dependent receptor | JYB84_16375 | P38370 | Negative | 3676538 - 3679546 | 109542.0 |
| exopolyphosphatase | JYB84_16380 | Q3IDD5 | Negative | 3679826 - 3680743 | 32335.6 |
| atp-dependent rna helicase rhlb | JYB84_16385 | A1SAL1 | Negative | 3680743 - 3682059 | 49052.9 |
| thioredoxin trxa | JYB84_16390 | P0AA27 | Positive | 3682212 - 3682538 | 11793.2 |
| transcription termination factor rho | JYB84_16395 | P0AG32 | Positive | 3682759 - 3684024 | 47105.1 |
| lysr family transcriptional regulator | JYB84_16400 | P43011 | Negative | 3684087 - 3685004 | 34558.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

